<?xml version="1.0" encoding="utf-8"?>
<Journal>
<Journal-Info>
<name>International Journal of Pharma and Bio Sciences</name>
<website>ijpbs.net</website>
<email>editorijpbs@rediffmail.com (or) editorofijpbs@yahoo.com (or) prasmol@rediffmail.com</email>
</Journal-Info>
<article>
<article-id pub-id-type='other'>10.22376/ijpbs.2019.10.1.p1-12</article-id>
<issue_number>Volume 3 Issue 3</issue_number>
<issue_period>2012 (July - September)</issue_period>
<title>In Silico Identification And Comparison Of Surface Binding Pockets Of Vibrio Parahaemolyticus Thermostable Direct Hemolysin Proteins </title>
<abstract> lessThan i greaterThan V.parahaemolyticus lessThan /i greaterThan  pathogenicity has been associated with its ability to produce thermostable direct hemolysin (TDH) encoded by the  lessThan i greaterThan tdh lessThan /i greaterThan  gene. Although all  lessThan i greaterThan V.parahaemolyticus lessThan /i greaterThan  strains possess this gene some strains are hemolytic, intermediate or non-hemolytic. To assess the differences seen, we screened the surface of the TDH proteins showing variable hemolytic activity for identification of possible pockets/cavities. We report here the probable large binding pockets associated with TDH, the key residues involved in their formation and their physicochemical parameters. Several 'hotspot' residues associated with binding sites identified are also reported. This report is the first to study the surface of the TDH protein, the results of which could be used in planning experiments for further understanding the way the protein expresses and interacts.</abstract>
<authors>Malathi Shekar, Iddya Karunasagar And Indrani Karunasagar</authors>
<keywords>Vibrio parahaemolyticus, Thermostable direct hemolysin, Surface pockets, binding sites, hotspots</keywords>
<pages>280-288</pages>
</article>
</Journal>
